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王阳, 孙振婷, 胡涛, 李吉涛. 多年生黑麦草VQ家族基因的鉴定及分析[J]. 植物科学学报. doi: 10.11913/PSJ.2095-0837.23072
引用本文: 王阳, 孙振婷, 胡涛, 李吉涛. 多年生黑麦草VQ家族基因的鉴定及分析[J]. 植物科学学报. doi: 10.11913/PSJ.2095-0837.23072
Identification and expression analysis of VQ Family Genes in Perennial ryegrass[J]. Plant Science Journal. doi: 10.11913/PSJ.2095-0837.23072
Citation: Identification and expression analysis of VQ Family Genes in Perennial ryegrass[J]. Plant Science Journal. doi: 10.11913/PSJ.2095-0837.23072

多年生黑麦草VQ家族基因的鉴定及分析

Identification and expression analysis of VQ Family Genes in Perennial ryegrass

  • 摘要: VQ(VQ Motif-Containing Proteins)是植物特有的一类蛋白,在植物生长发育及抵御生物与非生物胁迫中发挥着重要作用,但在多年生黑麦草(Lolium perenne L.)中鲜有VQ基因相关研究报导。本研究利用生物信息学方法在多年生黑麦草基因组中鉴定到52个LpVQ基因,其不均匀地分布于黑麦草的7条染色体上。细胞定位预测显示LpVQ蛋白主要定位于细胞核,仅LpVQ45定位于细胞膜。进一步系统进化分析表明,LpVQ被分成7个亚家族,与拟南芥只存在4对直系同源基因。对LpVQ家族进行基因结构分析发现,88.46%(46/52)的LpVQ基因无内含子。最后,对黑暗、高温及盐胁迫处理下的LpVQ进行定量分析,结果显示,从各亚家族中随机选取的21个LpVQ基因不同程度的响应黑暗、高温及盐胁迫,且在胁迫早期快速响应。本研究为进一步研究多年生黑麦草VQ家族基因在非生物胁迫中的功能奠定了理论基础。

     

    Abstract: VQ (VQ Motif-Containing Proteins) is a kind of plant-specific protein, which plays an important role in plant growth and development and resistance to biotic and abiotic stress, but there are few reports on VQ gene in perennial ryegrass (Lolium perenne L.). In this study, 52 LpVQ genes were identified in the genome of perennial ryegrass by bioinformatics methods, which were unevenly distributed on 7 chromosomes of ryegrass. Cell localization prediction showed that LpVQ protein was mainly located in the nucleus, only LpVQ45 was located in the cell membrane. Further phylogenetic analysis showed that LpVQ was divided into 7 subfamilies and there were only 4 pairs of lineal homologous genes with Arabidopsis thaliana. Based on the gene structure analysis of the LpVQ family, it was found that 88.46% of the LpVQ gene had no intron. Finally, the quantitative analysis of LpVQ under dark, high temperature and salt stress showed that the randomly selected LpVQ genes from each subfamily responded to dark, high temperature and salt stress in varying degrees, and responded quickly in the early stage of stress. This study laid a theoretical foundation for further study on the function of VQ family genes of perennial ryegrass under abiotic stress.

     

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