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Mu Shuai-Cheng, Zhu Xu-Li, Ye Mei-Xia, Wu Rong-Ling. Application of multi-trait functional mapping of QTL in Populus euphratica Oliv. seedlings[J]. Plant Science Journal, 2022, 40(3): 365-377. DOI: 10.11913/PSJ.2095-0837.2022.30365
Citation: Mu Shuai-Cheng, Zhu Xu-Li, Ye Mei-Xia, Wu Rong-Ling. Application of multi-trait functional mapping of QTL in Populus euphratica Oliv. seedlings[J]. Plant Science Journal, 2022, 40(3): 365-377. DOI: 10.11913/PSJ.2095-0837.2022.30365
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Application of multi-trait functional mapping of QTL in Populus euphratica Oliv. seedlings

  • 1. Center for Computational Biology, College of Biological Sciences and Technology, Beijing Forestry University, Beijing 100083, China;

  • 2. Center for Statistic Genetics Departments of Public Health Sciences and Statistics, Pennsylvania State University, Hershey, PA 17033, USA

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This work was supported by grants from the National Natural Science Foundation of China (32071796), China Postdoctoral Science Foundation Funded Project (2019M660496), and Science and Technology Innovation Program of Beijing Forestry University (BLX201912).

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  • Received Date: November 08, 2021
  • Revised Date: February 21, 2022
  • Available Online: October 31, 2022
  • Published Date: June 27, 2022
    Graphical Abstract
    • Abstract
  • Functional mapping frameworks can characterize quantitative trait loci (QTL) or nucleotides underlying complex dynamic traits. Functional mapping has been widely used in QTL mapping of a single trait or two traits, but research on multiple correlated traits remains relatively scarce. In this study, the structured antedependence (SAD) model was further derived and used to fit time-dependent covariance matrices for multiple traits. Four growth related traits of 340 Populus euphratica Oliv. F1 populations as well as simulation experiments were used to test this multi-trait functional mapping model. In total, 173 significant loci were located on the chromosomes, except for 4, 9, 10, 15, and 16. Functional annotation identified 32 genes involved in early chloroplast development, lateral auxin transport, abiotic stress tolerance, and transmembrane transport system switching.
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