Advance Search
LI Xi, ZHU Ming, SUN Yan-Xia, ZHONG Yang, LI Jian-Qiang. Systematic Position of Cistanche (Orobanchaceae) Based on cpDNA rps16 and ncDNA ITS Sequences[J]. Plant Science Journal, 2012, 30(5): 431-436. DOI: 10.3724/SP.J.1142.2012.50431
Citation: LI Xi, ZHU Ming, SUN Yan-Xia, ZHONG Yang, LI Jian-Qiang. Systematic Position of Cistanche (Orobanchaceae) Based on cpDNA rps16 and ncDNA ITS Sequences[J]. Plant Science Journal, 2012, 30(5): 431-436. DOI: 10.3724/SP.J.1142.2012.50431
shu

Systematic Position of Cistanche (Orobanchaceae) Based on cpDNA rps16 and ncDNA ITS Sequences

  • 1.

    Ministry of Education Key Laboratory for Biodiversity Science and Ecological Engineering, School of Life Sciences,Fudan University, Shanghai 200433, China

  • 2. Key Laboratory of Plant Germplasm Enhancement and Specialty Agriculture,Wuhan Botanical Garden,Chinese Academy of Sciences, Wuhan 430074, China

  • 3. Graduate University of Chinese Academy of Science, Beijing 100039, China

  • 4. Institute for Biodiversity Science and Geobiology, Tibet University, Lhasa 850000, China

More Information
  • Received Date: April 26, 2012
  • Revised Date: May 17, 2012
  • Published Date: October 29, 2012
    Graphical Abstract
    • Abstract
  • Based on previous study of Orobanchaceae,we added sequence data of the genus Cistanche,used maximum parsimony,maximum likelihood and Bayesian inference to perform phylogenetic analysis,and investigated the systematic position of Cistanche in Orobanchaceae, as well as the generic relationships within Orobanchaceae. The phylogenetic trees respectively basing on sequences of rps16 and rps16+ITS revealed that Cistanche,Orobanche,and Boschniakia formed a one single clade,Cistanche was a sister to Orobanche,and holoparasi-tic,semiparasitic and non-parasitic taxon in Orobanchaceae fell into three separate clades.
    • FullText(HTML)
    • References (16)
  • [1]
    Young N D,Steiner K E,dePamphilis C W.The evolution of parasitism in Scrophulariaceae/Orobanchaceae: plastid gene sequences refute an evolutionary transition series[J].Ann Mo Bot Gard,1999, 86: 876-893.
    [2]
    Nickrent D L.The parasitic plant connection: parasitic plant genera.2010,Department of Plant Biology,Southern Illinois University,Carbondale,Illinois,USA.http://www.parasiticplants.siu.edu/ListParasites.htm.
    [3]
    Oxelman B,Lidén M,Berglund D.Chloroplast rps16 intron phylogeny of the tribe Sileneae (Caryophyllaceae)[J].Plant Syst Evol, 1997, 206: 393-410.
    [4]
    Andersson L,Rova J H E.The rps16 intron and the phylogeny of the Rubioideae (Rubiaceae)[J].Plant Syst Evol, 1999, 214: 161-186.
    [5]
    Asmussen C B,Chase M W.Coding and noncoding plastid DNA in palm systematics[J].Am J Bot, 2001, 88: 1103-1117.
    [6]
    Lee J,Hymowitz T.A molecular phylogenetic study of the subtribe Glycininae (Leguminosae) derived from the chloroplast DNA rps16 intron sequences[J].Am J Bot, 2001, 88: 2064-2073.
    [7]
    Downie S R,Katz-Downie D S.Phylogenetic ana-lysis of chloroplast rps16 intron sequences reveals relationships within the woody southern African Apiaceae subfamily Apioideae[J].Can J Bot,1999, 77: 1120-1135.
    [8]
    Manen J F,Habashi C,Jeanmonod D,Park J M,Schneeweiss G M.Phylogeny and intraspecific variability of holoparasitic Orobanche (Orobanchaceae) inferred from plastid rbcL sequences[J].Mol Phylogenet Evol, 2004, 33: 482-500.
    [9]
    Schneeweiss G M,Colwell A,Park J M,Jang C G,Stuessy T F.Phylogeny of holoparasitic Orobanche (Orobanchaceae) inferred from nuclear ITS sequences[J].Mol Phylogenet Evol, 2004, 30: 465-478.
    [10]
    Carlón L,Gómez Casares G,Laínz M,Moreno Moral G,Sánchez Pedrajaó,Schneeweiss G M.Más,a propósito de algunas Orobanche L. y Phelipanche Pomel (Orobanchaceae) del oeste del Palear＇tico[J].Doc Jardín Bot Atlánt Gijón, 2005, 3: 1-71
    [11]
    Bennett J, Mathews S.Phylogeny of the parasitic plant family Orobanchaceae inferred from Phytochrome A[J].Am J Bot, 2006, 93(7): 1039-1051.
    [12]
    Park J M,Manen J F,Colwell A E,Schneeweiss G M.A plastid gene phylogeny of the non-photosynthetic parasitic Orobanche (Orobanchaceae) and related genera[J].J Plant Res, 2008, 121: 365-376.
    [13]
    国家林业局保护司.中国珍稀濒危植物名录.2010.http://www.03964.com/read/0c5042f2734b28277fdb2f8d.html.
    [14]
    Shaw J,Lickey E B,Beck J T,Farmer S B,Liu W S,Miller J,Siripun K C,Winder C T,Schilling E E,Small R L.The tortoise and the hare. Ⅱ.Relative utility of 21 noncoding chloroplast DNA sequences for phylogenetic analysis[J].Am J Bot, 2005, 92: 142-166.
    [15]
    Ronquist F,Huelsenbeck J P.MrBayes 3: Baye-sian phylogenetic inference under mixed models[J].Bioinformatics, 2003, 19: 1572-1574.
    [16]
    dePamphilis C W,Palmer J D.Loss of photosynthetic and chlororespiratory genes from the plastid genome of a parasitic flowering plant[J].Nature,1990, 348: 337-339.
    • Related Articles

Catalog

    Get Citation
    PDF
    XML
    Article views (2892) PDF downloads (1845) Cited by()
    Turn off MathJax
    Article Contents
    Abstract
    References
    Copyright © 2022 Plant Science Journal 鄂ICP备05004779号-3
    Address：No. 201, Jiufeng 1st Road, Donghu High tech Zone, WuhanPostal Code：430074

    Supported by: Beijing Renhe Information Technology Co., Ltd.  Baidu Analytics

    /

    DownLoad:  Full-Size Img  PowerPoint
    Return
    Return