Increasing Efficiency of Taxonomic Studies and Practices: An Interactive Key of Chinese Orchidaceae

LI Hai-Wen; LIU Bing; LAI Yang-Jun; YANG Yong; LI Yi

doi:10.11913/PSJ.2095-0837.2016.10151

Plant Science Journal > 2016 > 34(1): 151-163. > DOI: 10.11913/PSJ.2095-0837.2016.10151 CSTR: 32231.14.PSJ.2095-0837.2016.10151

LI Hai-Wen, LIU Bing, LAI Yang-Jun, YANG Yong, LI Yi. Increasing Efficiency of Taxonomic Studies and Practices: An Interactive Key of Chinese Orchidaceae[J]. Plant Science Journal, 2016, 34(1): 151-163. DOI: 10.11913/PSJ.2095-0837.2016.10151

Citation:

PDF (6752 KB)

Increasing Efficiency of Taxonomic Studies and Practices: An Interactive Key of Chinese Orchidaceae

1. State Key Laboratory of Systematic and Evolutionary Botany, Institute of Botany, Chinese Academy of Sciences, Beijing 100093, China;
2. College of Life Science and Technology, Xinjiang University, Urumqi 830046, China;
3. Nanjing Institute of Geology and Paleontology, Chinese Academy of Sciences, Nanjing 210008, China

Funds:

This work was supported by grants from the National Natural Science Foundation of China (31270238, 31470301) and the Plant Specimen Digitization and Chinese Virtual Herbarium Establishment from the Ministry of Science and Technology(J1310002).

undefined

More Information

Received Date: August 05, 2015
Available Online: October 31, 2022
Published Date: February 27, 2016

Graphical Abstract

Abstract

Abstract

Compared with conventional identification keys, computer-based multi-access interactive keys have many advantages, e.g. easy to carry, update, identify, generate new data sets for additional scientific studies, promote dissemination of taxonomic knowledge and meet the needs of social development, as well as being straightforward, with a wide range of users. It is important for taxonomic researchers to develop Chinese interactive keys for identification of native plants. This study introduced characteristics, development and application of interactive keys for Chinese Orchidaceae. The family Orchidaceae is a flagship group for biodiversity conservation and other biological studies, including many species with medicinal and ornamental value. However, it is difficult to identify orchids because Orchidaceae are one of the largest plant families in China and worldwide. By referring to Flora Reipublicae Popularis Sinicae and Flora of China, we created an interactive key for Chinese orchids using the new self-developed program MagIden. This novel interactive key not only provides a powerful identification tool of Chinese orchids for researchers and the public, but also generates new data sets in MVSP and Bayesian format for further scientific studies. Interactive keys are a powerful tool for increasing the efficiency of taxonomic studies and identification because of their advantages in the collection, updating, and analysis of data.
- Flora of China,
- Flora Reipublicae Popularis Sinicae,
- Interactive key,
- MagIden,
- Orchidaceae

FullText(HTML)

References (38)

References

[1]	文香英. 一种新的植物鉴定工具--交互式检索表(Interactive key)简介[J]. 仙湖, 2005, 14: 2-6. Wen XY. Interactive key: a new plant identification tool[J]. Fairylake, 2005, 14: 2-6.
[2]	Singh G. 植物系统分类学--综合理论及方法[M].刘全儒, 郭延平, 于明, 译. 北京: 化学工业出版社, 2008: 1-436. Singh G. Plant Systematics: an Integrated Approach[M]. Translated by Liu QR, Guo YP, Yu M. Beijing: Chemical Industry Press, 2008: 1-436.
[3]	Davis PH, Heywood VH. Principles of Angiosperm Taxonomy[M]. Ediburgh & London: Oliver & Boyd, 1963: 1-556.
[4]	Stace CA. 植物分类学和生物系统学[M].韦仲新, 缪汝槐, 谢翰铁, 译. 北京: 科学出版社, 1986: 1-328. Stace CA. Plant Taxonomy and Biosystematics[M]. Translated by Wei ZX, Miao RH, Xie HT. Beijing: Science Press, 1986: 1-328.
[5]	Judd WS, Campbell CS, Kellogg EA, Stevens PF, Donoghue MJ. 植物系统学[M]. 李德铢, 等译. 3版. 北京: 高等教育出版社, 2012: 1-613. Judd WS, Campbell CS, Kellogg EA, Stevens PF, Donoghue MJ. Plant Systematics: a Phylogenetic Approach[M]. Translated by Li DZ, et al. 3rd ed. Beiijng: Higher Education Press, 2012: 1-613.
[6]	Bittrich V, Souza CS, Coelho R. An interactive key(Lucid) for the identifying of the genera of seed plants from the Ducke Reserve, Manaus, AM, Brazil[J]. Rodriguésia, 2012, 63(1): 55-64.
[7]	Talent N, Dickinson RB, Dickinson TA. Character selection during integrative taxonomic identification: "best characters"[J]. Biodivers Informatics, 2014, 9: 1-12.
[8]	薛文鹏, 李子云, 侯学良. 多道检索表的研究进展[J]. 植物科学学报, 2014, 32(6): 655-660. Xue WP, Li ZY, Hou XL. Recent advances and future prospects of multi-access keys[J]. Plant Science Journal, 2014, 32(6): 655-660.
[9]	徐胜祥, 徐运清. 基于Web的种子植物分科检索系统的设计与实现[J]. 计算机应用研究, 2007, 24(11): 169-174. Xu SX, Xu YQ. Design and realization of taxonomic system for families of seed plant based on Web[J]. Application Research of Computers, 2007, 24(11): 169-174.
[10]	Correa MM, Scudeller VV, de Araujo MGP. Comparative leaf morphological analysis of 20 species of Chrysoba-lanaceae[J]. Acta Amaz, 2015, 45(1): 13-20.
[11]	Martellos S, Nimis PL. From local checklists to online identification portals: a case study on vascular plants[J]. PLoS One, 2015, 10(3): e0120970. doi: 10.1371/journal.pone.0120970.
[12]	Contreras WF, Galindo EG, Morillas AB, Lorenzo PM. An application of expert systems to botanical taxonomy[J]. Expert Syst Appl, 2003, 25: 425-430.
[13]	Fajardo W, Gibaja E, Moral P, Baena L, Quesada C. G.R.E.E.N.-An expert system to identify gymnosperms[J]. ICEIS, 2004, 2: 216-221.
[14]	Fedor P, MalenovskyI, Vanhara J, Sierka W, Havel J. Thrips(Thysanoptera) identification using artificial neural networks[J]. Bull Entomol Res, 2008, 98(5): 437-447.
[15]	Gan YY, Hou CS, Zhou T, Xu SF. Plant identification based on artificial intelligence[J]. Adv Mater Res, 2011, 255-260: 2286-2290.
[16]	Hearn DJ. Shape analysis for the automated identification of plants from images of leaves[J]. Taxon, 2009, 58(3): 961-981.
[17]	Dallwitz MJ. A comparison of matrix-based taxonomic identification systems with rule-based systems[M]//Xiong FL ed. Proceedings of IFAC Workshop on Expert Systems in Agriculture. Beijing: International Academic Publishers, 1992: 215-218.
[18]	Brach AR, Boufford DE. Why are we still producing paper Floras?[J]. Ann Mo Bot Gard, 2011, 98(3): 297-300.
[19]	Shivas RG, Beasley DR, McTaggart AR. Online identification guides for Australian smut fungi(Ustilaginomycotina and rust fungi (Pucciniales)[J]. IMA Fungus, 2014, 5(2): 195-202.
[20]	Wilson SB, Flory L. FloraGator: a novel, interactive, and online multiple-entry key for identifying plant families[J]. HortTechnol, 2012, 22(3): 410-412.
[21]	Zhang XB, Chen XX, Cheng JA. SIKey: a tool to generate secondary identification keys for targeted diagnosis[J]. Expert Syst Appl, 2008, 34(4): 2812-2818.
[22]	张润娟, 李伟. 世界水生植物科属检索系统的设计与建立[J]. 武汉植物学研究, 2002, 20(6): 481-484. Zhang RJ, Li W. Design and establishment of a query system for the families and genera of aquatic plants in the world[J]. Journal of Wuhan Botanical Research, 2002, 20(6): 481-484.
[23]	张小斌, 陈学新, 程家安. Lucid Phoenix: 交互式多媒体网络检索表工具[J]. 昆虫分类学报, 2006, 28(3): 231-234. Zhang XB, Chen XX, Cheng JA. Lucid Phoenix: a tool for building and deploying interactive, multimedia keys through internet[J]. Entomotaxonomia, 28(3): 231-234.
[24]	Wen XY. Interactive key for families of Chinese angiosperms[DB/OL].[2015-04-20].www.efloras.org.http://www.efloras.org/flora_page.aspx?flora_ 陈心启. 兰科(二)[M]//中国科学院中国植物志编辑委员会主编. 中国植物志:第18卷. 北京: 科学出版社, 1999: 1-463. Chen SC. Orchidaceae(Ⅱ)[M]//Delectis Florae Republicae Popularis Sinicae Agendae Academiae Sinicae ed. Flora Republicae Popularis Sinicae: Vol. 18. Beijing: Science Press, 1999: 1-463.
[33]	吉占和. 兰科(三)[M]//中国科学院中国植物志编辑委员会主编. 中国植物志:第19卷. 北京: 科学出版社, 1999: 1-485. Tsi ZH. Orchidaceae(Ⅲ)[M]//Delectis Florae Republicae Popularis Sinicae Agendae Academiae Sinicae ed. Flora Republicae Popularis Sinicae: Vol. 19. Beijing: Science Press, 1999: 1-485.
[34]	郎楷永. 兰科(一)[M]//中国科学院中国植物志编辑委员会主编. 中国植物志:第17卷. 北京: 科学出版社, 1999: 1-551. Lang KY. Orchidaceae(Ⅰ)[M]//Delectis Florae Republicae Popularis Sinicae Agendae Academiae Sinicae ed. Flora Republicae Popularis Sinicae: Vol. 17. Beijing: Science Press, 1999: 1-551.
[35]	Chen SC, Liu ZJ, Zhu GH, Lang KY, Ji ZH, Luo YB, Jin XH, Cribb PJ, Wood JJ, Gale SW, Ormerod P, Vermeulen JJ, Wood HP, Clayton D, Bell A. Orchidaceae[M]//Wu ZY, Raven PR, eds. Flora of China: Vol. 25. Beijing: Science Press, 2009: 1-506.
[36]	赖昆祺, 郑又华, 陈岳智, 李佑升, 邵广昭. 运用聚类分析与Google Maps于大量物种出现记录之研究[J]. 生物多样性, 2012, 20(1): 76-85. Lai KC, Cheng YH, Chen YC, Li YS, Shao KT. Applying cluster analysis and Google Maps in the study of large-scale species occurrence data[J]. Biodivers Science, 2012, 20(1): 76-85.
[37]	李健钧. 处理植物分类学描述语言的国际标准--DELTA系统[J]. 植物分类学报, 1996, 34(4): 447-452. Li JJ. Standard for processing plant taxonomic descriptions[J]. Acta Phytotaxonomica Sinica, 1996, 34(4): 447-452.
[38]	Brach AR, Song H. ActKey: a web-based interactive identification key program[J]. Taxon, 2005, 54(4): 1041-1046.
[39]	方伟, 刘恩德. 经典植物分类学的发展与iFlora[J]. 植物分类与资源学报, 2012, 34(6): 532-538. Fang W, Liu ED. The development of classical plant taxonomy and iFlora[J]. Plant Diversity and Research, 2012, 34(6): 532-538.
[40]	Cerutti G, Tougne L, Mille J, Vacavant A, Coquin D. Understanding leaves in natural images-a model-based approach for tree species identification[J]. Comput Vis Image Und, 2013, 117: 1482-1501.
[41]	Corney DPA, Clark JY, Tang HL, Wilkin P. Automatic extraction of leaf characters from herbarium specimens[J]. Taxon, 2012, 61(1): 231-244.
[42]	Farnsworth EJ, Chu M, Kress WJ, Neill AK, Best JH, Pickering J, Stevenson RD, Courtney GW, Van Dyk JK, Ellison AM. Next-generation field guides[J]. BioScience, 2013, 63(11): 891-899.
[43]	Gwo CY, Wei CH. Plant identification through images: using feature extraction of key points on leaf contours[J]. Appl Plant Sci, 2013, 1(11): 1200005.
[44]	Kalyoncu C, Toygar Ö. Geometric leaf classification[J]. Comput Vis Image Und, 2015, 133: 102-109.
[45]	Dallwitz MJ, Paine TA, Zurcher EJ. Interactive identification using the Internet[EB/OL].[2015-05-04]. http://delta-intkey.com.
[46]	Farr DF. On-line keys: more than just paper on the web[J]. Taxon, 2006, 55(3): 589-596.

[1]	Lei Ming, Zhao Zhi-Qiang, Chen Wen-Shuai, Wang Xi-Long. Bulbophyllum sonii Aver. & N.V. Duy, a new record of Orchidaceae from China[J]. Plant Science Journal, 2022, 40(3): 310-314. DOI: 10.11913/PSJ.2095-0837.2022.30310
[2]	Wang Jun-Jie, Cheng Yue-Hong, Ding Shi-Xiong, Wang Yan, Peng Shuai, Yang Jia-Xin, Sun Hong-Ou, Leng Zhi-Cheng, Hu Guang-Wan. Six new records of Orchidaceae in Sichuan Province[J]. Plant Science Journal, 2021, 39(3): 223-228. DOI: 10.11913/PSJ.2095-0837.2021.30223
[3]	Liu Fei-Hu, Huang Lang, Liu Huan, Tan Shao-Lin, Luo Huo-Lin, Yang Bo-Yun. Flora of Orchidaceae in Luoxiao Mountains and its ecogeographical characteristics[J]. Plant Science Journal, 2020, 38(4): 467-475. DOI: 10.11913/PSJ.2095-0837.2020.40467
[4]	Chen Li-Jun, Zhou Hong-Bo, Liu Zhong-Jian, Zheng Fang, Wang Yu, Rao Wen-Hui. Cymbidium×malipoense, a new hybrid of Orchidaceae from Yunnan, China[J]. Plant Science Journal, 2020, 38(2): 181-184. DOI: 10.11913/PSJ.2095-0837.2020.20181
[5]	DENG Xiao-Xiang, CHEN Yi-Ke, RAO Wen-Hui, CHEN Li-Jun. Dendrobium luoi, a New Species of Orchidaceae from China[J]. Plant Science Journal, 2016, 34(1): 9-12. DOI: 10.11913/PSJ.2095-0837.2016.10009
[6]	CHEN Li-Jun, LIU Zhong-Jian. Apostasia shenzhenica,A New Species of Apostasioideae(Orchidaceae) from China[J]. Plant Science Journal, 2011, 29(1): 38-41.
[7]	WANG Yi, WANG Yan. Habenaria anomaliflora,a New Record of Orchidaceae from China[J]. Plant Science Journal, 2010, 28(6): 696-697.
[8]	CHEN Li-Jun, LIU Zhong-Jian. Dendrobium moniliforme var.malipoense,A New Variety of Orchidaceae from China[J]. Plant Science Journal, 2008, 26(4): 357-360.
[9]	CHEN Li-Jun, RAO Wen-Hui. The Occurrence of Habenaria leptoloba(Orchidaceae) in Guangdong[J]. Plant Science Journal, 2008, 26(3): 255-258.
[10]	Chen Hengbin, Chang Yongtian. A NEW RECORDED GENUS OF FAMILY ORCHIDACEAE FROM CHINA──STIGMATODACTYLUS[J]. Plant Science Journal, 1994, 12(4): 324-326.

Cited By

Cited by

Periodical cited type(13)

1.	温锦丽，曹炜玉，王月，何艳丽，孙怡宁，原鹏强，孙博位，路文鹏. 基于主成分分析与聚类分析的软枣猕猴桃果实品质综合评价. 食品工业科技. 2024(01): 247-257 .
2.	唐笑，马倩倩，薛晓杰，姜乐璞，赵婧，姜中武. 液体硅肥对青脆李品质的影响. 农业工程. 2024(03): 61-64 .
3.	王金燕，徐嘉，王庆萱，于昕玉，魏宝东，程顺昌，孙阳，李斌. 1-MCP结合开孔包装对软枣猕猴桃果实软化的研究. 包装工程. 2024(09): 10-16 .
4.	罗轩，陈庆红，张蕾，高磊，白福玺，叶丽霞，汪志，彭珏. 红肉软枣猕猴桃新品种‘金红冠’. 园艺学报. 2024(S1): 45-46 .
5.	钟文娟，石盛佳，陈四维，宫勋，戢沛城，牟方生. 不同贮藏温度对采后菜用大豆3种营养物质含量的影响. 贵州农业科学. 2024(06): 96-102 .
6.	侯文焕，唐兴富，廖小芳，赵艳红. 贮藏温度对玫瑰茄果实品质及生理特性的影响. 食品研究与开发. 2024(17): 23-28 .
7.	李欣怡，孙翔宇，张文慧，张敏，彭雯，张春玲，马婷婷. 家庭贮藏条件下‘翠香’猕猴桃果实品质演变规律解析. 食品与发酵工业. 2024(22): 19-27 .
8.	刘肖冰. 基于主成分分析和聚类分析不同品种猕猴桃品质评价. 现代食品科技. 2024(10): 284-292 .
9.	黄文俊，韩飞，王周倩，杨阳，陈建漳，钟彩虹. ‘翠玉’猕猴桃果实在低温贮藏过程中的生理及品质变化. 湖南农业科学. 2024(12): 90-95 .
10.	刘新宇，章学来，刘玉岭，张信荣. 间歇热处理时间对樱桃温度场及贮藏品质的影响. 农业工程学报. 2023(04): 248-255 .
11.	王乐兵，彭承祥，孙晨晨，孙林，钟志海，李德海，刘正一. 4种不同涂膜处理对软枣猕猴桃贮藏品质的影响. 食品安全质量检测学报. 2023(09): 232-239 .
12.	帅良，林德胜，廖玲燕，刘云芬，盘喻颜，梁园丽，殷菲胧，蔡文. 不同贮藏温度对百香果果实糖酸组分变化的影响. 核农学报. 2023(12): 2408-2416 .
13.	王茜茜，刘焱，顾冉，张耀伟. 成熟度和贮藏温度对黄菇娘品质的影响. 保鲜与加工. 2023(11): 14-23+30 .

Other cited types(12)

Get Citation

PDF

XML

Article views (1551) PDF downloads (2059) Cited by(25)

Turn off MathJax

Article Contents

Abstract

References

Increasing Efficiency of Taxonomic Studies and Practices: An Interactive Key of Chinese Orchidaceae

Abstract

References

Related Articles

Cited by

Periodical cited type(13)

Other cited types(12)

Catalog

Increasing Efficiency of Taxonomic Studies and Practices: An Interactive Key of Chinese Orchidaceae

Abstract

References

Related Articles

Cited by

Periodical cited type(13)

Other cited types(12)

Catalog

Export File

Citation

Format

Content