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Yu Shu-Xia, Liang Qiong, Luo Hui, Huang Ruo-Qi, Li Yong, Zhang Yan-Jun. Complete chloroplast genome of Epimedium pinnatum Fisch. ex DC.(Berberidaceae)[J]. Plant Science Journal, 2022, 40(1): 39-46. DOI: 10.11913/PSJ.2095-0837.2022.10039
Citation: Yu Shu-Xia, Liang Qiong, Luo Hui, Huang Ruo-Qi, Li Yong, Zhang Yan-Jun. Complete chloroplast genome of Epimedium pinnatum Fisch. ex DC.(Berberidaceae)[J]. Plant Science Journal, 2022, 40(1): 39-46. DOI: 10.11913/PSJ.2095-0837.2022.10039

Complete chloroplast genome of Epimedium pinnatum Fisch. ex DC.(Berberidaceae)

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This work was supported by grants from the National Natural Science Foundation of China (31670346, 32071675), Key Scientific Research Talents Project of Wuhan Botanical Garden, Chinese Academy of Sciences (Y855281A05), and Application Foundation Frontier Project of Wuhan Science and Technology Bureau (2019020701011435).

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  • Received Date: May 05, 2021
  • Revised Date: May 16, 2021
  • Available Online: October 31, 2022
  • Published Date: February 27, 2022
  • Epimedium pinnatum Fisch. ex DC.(Berberidaceae) is a perennial herb with ornamental and medicinal value distributed in the Caucasus region. In this study, the Illumina NovaSeq 6000 sequencing system was used to assemble the complete chloroplast genome sequence of E. pinnatum for the first time. Results showed that the total length of the chloroplast genome was 156 155 bp with 38.82% GC content, comprising a large single-copy region (LSC, 89 425 bp), small single-copy region (SSC, 16 284 bp), and pair of inverted repeat regions (IRa and IRb, 25 223 bp). The chloroplast genome of E. pinnatum contained 112 genes, including 78 protein-coding genes, 30 transfer RNA (tRNA) genes, and four ribosomal RNA (rRNA) genes. Phylogenetic analysis showed that E. pinnatum subgen. Epimedium and sect. Macroceras was clustered on a branch, which was separated from the branch composed of species from sect. Diphyllon, subgen. Epimedium. These results suggest that further study is needed to clarify the natural system of Epimedium based on more data.
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